IL_5IMR_128

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GGUUUCCC*GGGUAGCC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|D|G|2685
5IMR|1|D|G|2686
5IMR|1|D|U|2687
5IMR|1|D|U|2688
5IMR|1|D|U|2689
5IMR|1|D|C|2690
5IMR|1|D|C|2691
5IMR|1|D|C|2692
*
5IMR|1|D|G|2717
5IMR|1|D|G|2718
5IMR|1|D|G|2719
5IMR|1|D|U|2720
5IMR|1|D|A|2721
5IMR|1|D|G|2722
5IMR|1|D|C|2723
5IMR|1|D|C|2724

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain b

50S ribosomal protein L3

Chain g

50S ribosomal protein L14

Chain j

50S ribosomal protein L17

Chain l

50S ribosomal protein L19