IL_5IMR_159

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GAGCACU*AAACUCC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|D|G|862
5IMR|1|D|A|863
5IMR|1|D|G|864
5IMR|1|D|C|865
5IMR|1|D|A|866
5IMR|1|D|C|867
5IMR|1|D|U|868
*
5IMR|1|D|A|909
5IMR|1|D|A|910
5IMR|1|D|A|911
5IMR|1|D|C|912
5IMR|1|D|U|913
5IMR|1|D|C|914
5IMR|1|D|C|915

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain E

5S ribosomal RNA; 5S rRNA

Chain i

50S ribosomal protein L16

Chain r

50S ribosomal protein L25