IL_5IMR_167

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CGCAGGGUG*CAACAAGCUCUG

Length

21 nucleotides

Bulged bases

5IMR|1|D|U|1482, 5IMR|1|D|A|1508, 5IMR|1|D|C|1509

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|D|C|1474
5IMR|1|D|G|1475
5IMR|1|D|C|1476
5IMR|1|D|A|1477
5IMR|1|D|G|1478
5IMR|1|D|G|1479
5IMR|1|D|G|1480
5IMR|1|D|U|1482
5IMR|1|D|G|1483
*
5IMR|1|D|C|1506
5IMR|1|D|A|1507
5IMR|1|D|A|1508
5IMR|1|D|C|1509
5IMR|1|D|A|1510
5IMR|1|D|A|1511
5IMR|1|D|G|1512
5IMR|1|D|C|1513
5IMR|1|D|U|1514
5IMR|1|D|C|1515
5IMR|1|D|U|1516
5IMR|1|D|G|1517

Current chains

Chain D

23S ribosomal RNA

Nearby chains