IL_5IMR_198
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- CUC*GCGAG
- Length
- 8 nucleotides
- Bulged bases
- 5IMR|1|D|G|2576, 5IMR|1|D|A|2577
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5IMR_198 not in the Motif Atlas
- Homologous match to IL_7A0S_089
- Geometric discrepancy: 0.3638
- The information below is about IL_7A0S_089
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
5IMR|1|D|C|2510
5IMR|1|D|U|2511
5IMR|1|D|C|2512
*
5IMR|1|D|G|2574
5IMR|1|D|C|2575
5IMR|1|D|G|2576
5IMR|1|D|A|2577
5IMR|1|D|G|2578
Current chains
- Chain D
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L3
- Chain w
- 50S ribosomal protein L32
Coloring options: