IL_5IT8_385

3D structure

PDB id

5IT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution structure of the Escherichia coli ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.12 Å

Loop

Sequence

GGGAGGC*GCCGACCUUGAAAUACC

Length

24 nucleotides

Bulged bases

5IT8|1|CA|A|2163, 5IT8|1|CA|C|2164, 5IT8|1|CA|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IT8|1|CA|G|2123
5IT8|1|CA|G|2124
5IT8|1|CA|G|2125
5IT8|1|CA|A|2126
5IT8|1|CA|G|2127
5IT8|1|CA|G|2128
5IT8|1|CA|C|2129
*
5IT8|1|CA|G|2159
5IT8|1|CA|C|2160
5IT8|1|CA|C|2161
5IT8|1|CA|G|2162
5IT8|1|CA|A|2163
5IT8|1|CA|C|2164
5IT8|1|CA|C|2165
5IT8|1|CA|U|2166
5IT8|1|CA|U|2167
5IT8|1|CA|G|2168
5IT8|1|CA|A|2169
5IT8|1|CA|A|2170
5IT8|1|CA|A|2171
5IT8|1|CA|U|2172
5IT8|1|CA|A|2173
5IT8|1|CA|C|2174
5IT8|1|CA|C|2175

Current chains

Chain CA

23S rRNA

Nearby chains