IL_5J3C_012

3D structure

PDB id

5J3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S termination complex containing E. coli RF1

Experimental method

X-RAY DIFFRACTION

Resolution

3.04 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5J3C_012 not in the Motif Atlas

Homologous match to IL_5J7L_015

Geometric discrepancy: 0.0879

The information below is about IL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47074.2

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

5J3C|1|QA|U|249
5J3C|1|QA|A|250
5J3C|1|QA|G|251
5J3C|1|QA|U|252
*
5J3C|1|QA|A|274
5J3C|1|QA|G|275

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QQ

30S ribosomal protein S17