IL_5J3C_112

3D structure

PDB id

5J3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S termination complex containing E. coli RF1

Experimental method

X-RAY DIFFRACTION

Resolution

3.04 Å

Loop

Sequence

UG*CACAA

Length

7 nucleotides

Bulged bases

5J3C|1|RA|C|1584

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5J3C_112 not in the Motif Atlas

Homologous match to IL_7RQB_054

Geometric discrepancy: 0.114

The information below is about IL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_67474.4

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

5J3C|1|RA|U|1415
5J3C|1|RA|G|1416
*
5J3C|1|RA|C|1582
5J3C|1|RA|A|1583
5J3C|1|RA|C|1584
5J3C|1|RA|A|1586
5J3C|1|RA|A|1587

Current chains

Chain RA

23S rRNA

Nearby chains