Motif IL_67474.4 Version IL_67474.4 of this group appears in releases 3.77 to 3.86
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5TBW_036 | 5TBW | 0.0000 | 2 | 180 degree turn | 1 | LSU rRNA | C | 977 | G | 978 | A | 980 | U | 981 | * | A | 1102 | G | 1104 | cWW | cWW |
| 2 | IL_5J7L_301 | 5J7L | 0.5770 | 0 | 180 degree turn | DA | LSU rRNA | C | 1507 | A | 1508 | A | 1509 | G | 1510 | * | U | 1481 | G | 1482 | cWW | cWW |
| 3 | IL_7RQB_054 | 7RQB | 0.6990 | 1 | 180 degree turn (H) | 1A | LSU rRNA | C | 1582 | A | 1583 | A | 1586 | A | 1587 | * | U | 1415 | G | 1416 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUAU*AAG | 1 |
| CAAG*UG | 1 |
| CACAA*UG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUA*A | 1 |
| AA* | 1 |
| ACA* | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- 180 degree turn (2)
- 180 degree turn (H) (1)
- Basepair signature
- cWW-L-cWW-L
- Heat map statistics
- Min 0.58 | Avg 0.41 | Max 0.70
Coloring options: