IL_5J3C_188
3D structure
- PDB id
- 5J3C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S termination complex containing E. coli RF1
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.04 Å
Loop
- Sequence
- GCAAU*AC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5J3C_188 not in the Motif Atlas
- Geometric match to IL_5J7L_018
- Geometric discrepancy: 0.136
- The information below is about IL_5J7L_018
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_03109.3
- Basepair signature
- cWW-cWS-tWH-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
5J3C|1|XA|G|371
5J3C|1|XA|C|372
5J3C|1|XA|A|373
5J3C|1|XA|A|374
5J3C|1|XA|U|375
*
5J3C|1|XA|A|389
5J3C|1|XA|C|390
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XP
- 30S ribosomal protein S16
Coloring options: