3D structure

PDB id
5J7L (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
AGAAUU*AGGAAU
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_04668.2
Basepair signature
cWW-cWW-cWW-L-R-L-R-cWW
Number of instances in this motif group
8

Unit IDs

5J7L|1|AA|A|673
5J7L|1|AA|G|674
5J7L|1|AA|A|675
5J7L|1|AA|A|676
5J7L|1|AA|U|677
5J7L|1|AA|U|678
*
5J7L|1|AA|A|712
5J7L|1|AA|G|713
5J7L|1|AA|G|714
5J7L|1|AA|A|715
5J7L|1|AA|A|716
5J7L|1|AA|U|717

Current chains

Chain AA
16S rRNA

Nearby chains

Chain AF
30S ribosomal protein S6
Chain AK
30S ribosomal protein S11
Chain AR
30S ribosomal protein S18
Chain AU
30S ribosomal protein S21
Chain DC
50S ribosomal protein L2

Coloring options:

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