IL_5J7L_055

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAAG*CGGACC

Length

10 nucleotides

Bulged bases

5J7L|1|AA|A|1257, 5J7L|1|AA|A|1280, 5J7L|1|AA|C|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.2

Basepair signature

cWW-cSS-L-cWW

Number of instances in this motif group

2

Unit IDs

5J7L|1|AA|G|1255
5J7L|1|AA|A|1256
5J7L|1|AA|A|1257
5J7L|1|AA|G|1258
*
5J7L|1|AA|C|1277
5J7L|1|AA|G|1278
5J7L|1|AA|G|1279
5J7L|1|AA|A|1280
5J7L|1|AA|C|1281
5J7L|1|AA|C|1282

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AC

30S ribosomal protein S3

Chain AJ

30S ribosomal protein S10

Chain AN

30S ribosomal protein S14