IL_5J7L_190
3D structure
- PDB id
- 5J7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAA*UCC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5J7L_190 not in the Motif Atlas
- Homologous match to IL_5J7L_305
- Geometric discrepancy: 0.0343
- The information below is about IL_5J7L_305
- Detailed Annotation
- Isolated tWW turn
- Broad Annotation
- No text annotation
- Motif group
- IL_67095.2
- Basepair signature
- cWW-tWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
5J7L|1|CA|G|1663
5J7L|1|CA|A|1664
5J7L|1|CA|A|1665
*
5J7L|1|CA|U|1995
5J7L|1|CA|C|1996
5J7L|1|CA|C|1997
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain CD
- 50S ribosomal protein L3
- Chain CL
- 50S ribosomal protein L14
- Chain CQ
- 50S ribosomal protein L19
Coloring options: