IL_5J7L_276

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCA*UG

Length

5 nucleotides

Bulged bases

5J7L|1|DA|C|995

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_61258.15

Basepair signature

cWW-L-cWW

Number of instances in this motif group

41

Unit IDs

5J7L|1|DA|C|994
5J7L|1|DA|C|995
5J7L|1|DA|A|996
*
5J7L|1|DA|U|1159
5J7L|1|DA|G|1160

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D0

50S ribosomal protein L30

Chain DK

50S ribosomal protein L13

Chain DR

50S ribosomal protein L20

Chain DS

50S ribosomal protein L21