IL_5J7L_347

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UCACU*AAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.10

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

16

Unit IDs

5J7L|1|DA|U|2680
5J7L|1|DA|C|2681
5J7L|1|DA|A|2682
5J7L|1|DA|C|2683
5J7L|1|DA|U|2684
*
5J7L|1|DA|A|2725
5J7L|1|DA|A|2726
5J7L|1|DA|A|2727

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DD

50S ribosomal protein L3

Chain DL

50S ribosomal protein L14

Chain DO

50S ribosomal protein L17

Chain DQ

50S ribosomal protein L19