IL_5J8B_041
3D structure
- PDB id
- 5J8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CGAAGACAGC*GUCGAG
- Length
- 16 nucleotides
- Bulged bases
- 5J8B|1|A|A|1091
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5J8B|1|A|C|1088
5J8B|1|A|G|1089
5J8B|1|A|A|1090
5J8B|1|A|A|1091
5J8B|1|A|G|1092
5J8B|1|A|A|1093
5J8B|1|A|C|1094
5J8B|1|A|A|1095
5J8B|1|A|G|1096
5J8B|1|A|C|1097
*
5J8B|1|A|G|1152
5J8B|1|A|U|1153
5J8B|1|A|C|1154
5J8B|1|A|G|1155
5J8B|1|A|A|1156
5J8B|1|A|G|1157
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 9
- 50S ribosomal protein L36
- Chain H
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L10
Coloring options: