IL_5J8B_086
3D structure
- PDB id
- 5J8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CUGUGAACCCC*GGGGGGAG
- Length
- 19 nucleotides
- Bulged bases
- 5J8B|1|A|G|2152, 5J8B|1|A|U|2153, 5J8B|1|A|G|2154, 5J8B|1|A|G|2178
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5J8B|1|A|C|2150
5J8B|1|A|U|2151
5J8B|1|A|G|2152
5J8B|1|A|U|2153
5J8B|1|A|G|2154
5J8B|1|A|A|2155
5J8B|1|A|A|2156
5J8B|1|A|C|2157
5J8B|1|A|C|2158
5J8B|1|A|C|2159
5J8B|1|A|C|2160
*
5J8B|1|A|G|2173
5J8B|1|A|G|2174
5J8B|1|A|G|2175
5J8B|1|A|G|2176
5J8B|1|A|G|2177
5J8B|1|A|G|2178
5J8B|1|A|A|2179
5J8B|1|A|G|2180
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L1
Coloring options: