IL_5JB3_048

3D structure

PDB id

5JB3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

5.34 Å

Loop

Sequence

CGGAUC*GUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5JB3|1|2|C|1263
5JB3|1|2|G|1264
5JB3|1|2|G|1265
5JB3|1|2|A|1266
5JB3|1|2|U|1267
5JB3|1|2|C|1268
*
5JB3|1|2|G|1289
5JB3|1|2|U|1290
5JB3|1|2|G|1291
5JB3|1|2|A|1292
5JB3|1|2|A|1293
5JB3|1|2|G|1294

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain H

30S ribosomal protein S7

Chain O

30S ribosomal protein S13

Chain U

30S ribosomal protein S19e