3D structure

PDB id
5JB3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
5.34 Å

Loop

Sequence
CGAG*UGAG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5JB3|1|2|C|1376
5JB3|1|2|G|1377
5JB3|1|2|A|1378
5JB3|1|2|G|1379
*
5JB3|1|2|U|1436
5JB3|1|2|G|1437
5JB3|1|2|A|1438
5JB3|1|2|G|1439

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

Chain 7
Translation initiation factor 2 subunit gamma
Chain N
30S ribosomal protein S12

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1706 s