IL_5JCS_010
3D structure
- PDB id
- 5JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- CCGAAAGA*UCUAGUAGCUG
- Length
- 19 nucleotides
- Bulged bases
- 5JCS|1|x|A|933, 5JCS|1|x|G|937
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JCS|1|x|C|803
5JCS|1|x|C|804
5JCS|1|x|G|805
5JCS|1|x|A|806
5JCS|1|x|A|807
5JCS|1|x|A|808
5JCS|1|x|G|809
5JCS|1|x|A|810
*
5JCS|1|x|U|930
5JCS|1|x|C|931
5JCS|1|x|U|932
5JCS|1|x|A|933
5JCS|1|x|G|934
5JCS|1|x|U|935
5JCS|1|x|A|936
5JCS|1|x|G|937
5JCS|1|x|C|938
5JCS|1|x|U|939
5JCS|1|x|G|940
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain L
- 60S ribosomal protein L13-A
- Chain N
- 60S ribosomal protein L15-A
- Chain a
- 60S ribosomal protein L28
- Chain j
- 60S ribosomal protein L37-A
Coloring options: