3D structure

PDB id
5JCS (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
Experimental method
ELECTRON MICROSCOPY
Resolution
9.5 Å

Loop

Sequence
CUGA*UCG
Length
7 nucleotides
Bulged bases
5JCS|1|x|U|874
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5JCS|1|x|C|873
5JCS|1|x|U|874
5JCS|1|x|G|875
5JCS|1|x|A|876
*
5JCS|1|x|U|885
5JCS|1|x|C|886
5JCS|1|x|G|887

Current chains

Chain x
25S ribosomal RNA

Nearby chains

Chain B
60S ribosomal protein L3
Chain j
60S ribosomal protein L37-A

Coloring options:

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