IL_5JCS_030

3D structure

PDB id

5JCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

GUCAAAGU*ACCAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5JCS|1|x|G|2210
5JCS|1|x|U|2211
5JCS|1|x|C|2212
5JCS|1|x|A|2213
5JCS|1|x|A|2214
5JCS|1|x|A|2215
5JCS|1|x|G|2216
5JCS|1|x|U|2217
*
5JCS|1|x|A|2229
5JCS|1|x|C|2230
5JCS|1|x|C|2231
5JCS|1|x|A|2232
5JCS|1|x|A|2233
5JCS|1|x|G|2234
5JCS|1|x|C|2235

Current chains

Chain x

25S ribosomal RNA

Nearby chains

Chain i

60S ribosomal protein L36-A