IL_5JCS_041

3D structure

PDB id

5JCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

CCACACAA*UGCGUGG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5JCS|1|x|C|3161
5JCS|1|x|C|3162
5JCS|1|x|A|3163
5JCS|1|x|C|3164
5JCS|1|x|A|3165
5JCS|1|x|C|3166
5JCS|1|x|A|3167
5JCS|1|x|A|3168
*
5JCS|1|x|U|3283
5JCS|1|x|G|3284
5JCS|1|x|C|3285
5JCS|1|x|G|3286
5JCS|1|x|U|3287
5JCS|1|x|G|3288
5JCS|1|x|G|3289

Current chains

Chain x

25S ribosomal RNA

Nearby chains

Chain P

60S ribosomal protein L17-A

Chain f

60S ribosomal protein L33-A