IL_5JCS_062
3D structure
- PDB id
- 5JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- UAGAGUUAAGGUGCCGGAA*UACCUAUACUCUA
- Length
- 32 nucleotides
- Bulged bases
- 5JCS|1|x|U|1331
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JCS|1|x|U|1162
5JCS|1|x|A|1163
5JCS|1|x|G|1164
5JCS|1|x|A|1165
5JCS|1|x|G|1166
5JCS|1|x|U|1167
5JCS|1|x|U|1168
5JCS|1|x|A|1169
5JCS|1|x|A|1170
5JCS|1|x|G|1171
5JCS|1|x|G|1172
5JCS|1|x|U|1173
5JCS|1|x|G|1174
5JCS|1|x|C|1175
5JCS|1|x|C|1176
5JCS|1|x|G|1177
5JCS|1|x|G|1178
5JCS|1|x|A|1179
5JCS|1|x|A|1180
*
5JCS|1|x|U|1325
5JCS|1|x|A|1326
5JCS|1|x|C|1327
5JCS|1|x|C|1328
5JCS|1|x|U|1329
5JCS|1|x|A|1330
5JCS|1|x|U|1331
5JCS|1|x|A|1332
5JCS|1|x|C|1333
5JCS|1|x|U|1334
5JCS|1|x|C|1335
5JCS|1|x|U|1336
5JCS|1|x|A|1337
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain F
- 60S ribosomal protein L7-A
- Chain O
- 60S ribosomal protein L16-A
- Chain Q
- 60S ribosomal protein L18-A
- Chain S
- 60S ribosomal protein L20-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
- Chain z
- 5S ribosomal RNA; 5S rRNA
Coloring options: