IL_5JCS_080
3D structure
- PDB id
- 5JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- UGGCAGGAUAAAUCC*GGGAAUACUGCCAG
- Length
- 29 nucleotides
- Bulged bases
- 5JCS|1|x|A|519, 5JCS|1|x|U|520, 5JCS|1|x|C|577, 5JCS|1|x|A|578
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JCS|1|x|U|512
5JCS|1|x|G|513
5JCS|1|x|G|514
5JCS|1|x|C|515
5JCS|1|x|A|516
5JCS|1|x|G|517
5JCS|1|x|G|518
5JCS|1|x|A|519
5JCS|1|x|U|520
5JCS|1|x|A|521
5JCS|1|x|A|522
5JCS|1|x|A|523
5JCS|1|x|U|524
5JCS|1|x|C|525
5JCS|1|x|C|526
*
5JCS|1|x|G|566
5JCS|1|x|G|567
5JCS|1|x|G|568
5JCS|1|x|A|569
5JCS|1|x|A|570
5JCS|1|x|U|571
5JCS|1|x|A|572
5JCS|1|x|C|573
5JCS|1|x|U|574
5JCS|1|x|G|575
5JCS|1|x|C|576
5JCS|1|x|C|577
5JCS|1|x|A|578
5JCS|1|x|G|579
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain F
- 60S ribosomal protein L7-A
- Chain M
- 60S ribosomal protein L14-A
- Chain S
- 60S ribosomal protein L20-A
Coloring options: