IL_5JTE_047
3D structure
- PDB id
- 5JTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GG*UCAUC
- Length
- 7 nucleotides
- Bulged bases
- 5JTE|1|AA|C|1200, 5JTE|1|AA|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5JTE_047 not in the Motif Atlas
- Homologous match to IL_4LFB_045
- Geometric discrepancy: 0.113
- The information below is about IL_4LFB_045
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_24264.1
- Basepair signature
- cWW-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
5JTE|1|AA|G|1057
5JTE|1|AA|G|1058
*
5JTE|1|AA|U|1199
5JTE|1|AA|C|1200
5JTE|1|AA|A|1201
5JTE|1|AA|U|1202
5JTE|1|AA|C|1203
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AC
- 30S ribosomal protein S3
- Chain AJ
- 30S ribosomal protein S10
- Chain AN
- 30S ribosomal protein S14
Coloring options: