IL_5JU8_012
3D structure
- PDB id
- 5JU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 5JU8|1|AA|U|173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5JU8_012 not in the Motif Atlas
- Homologous match to IL_5J7L_012
- Geometric discrepancy: 0.0945
- The information below is about IL_5J7L_012
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
5JU8|1|AA|G|147
5JU8|1|AA|G|148
5JU8|1|AA|A|149
5JU8|1|AA|U|150
5JU8|1|AA|A|151
5JU8|1|AA|A|152
5JU8|1|AA|C|153
*
5JU8|1|AA|G|168
5JU8|1|AA|C|169
5JU8|1|AA|U|170
5JU8|1|AA|A|171
5JU8|1|AA|A|172
5JU8|1|AA|U|173
5JU8|1|AA|A|174
5JU8|1|AA|C|175
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AT
- 30S ribosomal protein S20
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