IL_5JUT_123
3D structure
- PDB id
- 5JUT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UGAGGUAA*UAAAUAUG
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JUT|1|B|U|990
5JUT|1|B|G|991
5JUT|1|B|A|992
5JUT|1|B|G|993
5JUT|1|B|G|994
5JUT|1|B|U|995
5JUT|1|B|A|996
5JUT|1|B|A|997
*
5JUT|1|B|U|1052
5JUT|1|B|A|1053
5JUT|1|B|A|1054
5JUT|1|B|A|1055
5JUT|1|B|U|1056
5JUT|1|B|A|1057
5JUT|1|B|U|1058
5JUT|1|B|G|1059
Current chains
- Chain B
- 25S ribosomal RNA
Nearby chains
- Chain D
- 5S ribosomal RNA; 5S rRNA
- Chain GA
- eL29 (yeast L29)
- Chain I
- uL18 (yeast L5)
- Chain K
- uL30 (yeast L7)
- Chain N
- uL16 (yeast L10)
- Chain Y
- eL21 (yeast L21)
Coloring options: