IL_5K0Y_051
3D structure
- PDB id
- 5K0Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- GCG*CC
- Length
- 5 nucleotides
- Bulged bases
- 5K0Y|1|A|C|1105
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5K0Y_051 not in the Motif Atlas
- Homologous match to IL_4V88_439
- Geometric discrepancy: 0.3974
- The information below is about IL_4V88_439
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
5K0Y|1|A|G|1104
5K0Y|1|A|C|1105
5K0Y|1|A|G|1106
*
5K0Y|1|A|C|1119
5K0Y|1|A|C|1120
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain Y
- 40S ribosomal protein S27
- Chain e
- ribosomal protein eS17
- Chain f
- ribosomal protein uS2
- Chain i
- ribosomal protein eS1
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