IL_5K0Y_108
3D structure
- PDB id
- 5K0Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 5K0Y|1|A|U|1580, 5K0Y|1|A|G|1582
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5K0Y|1|A|G|1536
5K0Y|1|A|C|1537
5K0Y|1|A|U|1538
5K0Y|1|A|C|1539
5K0Y|1|A|A|1540
5K0Y|1|A|G|1541
5K0Y|1|A|C|1542
5K0Y|1|A|G|1543
5K0Y|1|A|U|1544
5K0Y|1|A|G|1545
*
5K0Y|1|A|C|1577
5K0Y|1|A|C|1578
5K0Y|1|A|G|1579
5K0Y|1|A|U|1580
5K0Y|1|A|U|1581
5K0Y|1|A|G|1582
5K0Y|1|A|A|1583
5K0Y|1|A|A|1584
5K0Y|1|A|C|1585
5K0Y|1|A|C|1586
5K0Y|1|A|C|1587
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain H
- ribosomal protein uS9
- Chain J
- ribosomal protein uS14
- Chain R
- ribosomal protein eS19
- Chain U
- ribosomal protein uS7
- Chain W
- ribosomal protein eS25
- Chain g
- ribosomal protein uS3
- Chain h
- ribosomal protein uS10
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