IL_5KPV_050
3D structure
- PDB id
- 5KPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GUUGC*GAACUC
- Length
- 11 nucleotides
- Bulged bases
- 5KPV|1|26|U|1126
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5KPV_050 not in the Motif Atlas
- Homologous match to IL_5J7L_051
- Geometric discrepancy: 0.162
- The information below is about IL_5J7L_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06691.1
- Basepair signature
- cWW-cWS-L-R-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
5KPV|1|26|G|1124
5KPV|1|26|U|1125
5KPV|1|26|U|1126
5KPV|1|26|G|1127
5KPV|1|26|C|1128
*
5KPV|1|26|G|1144
5KPV|1|26|A|1145
5KPV|1|26|A|1146
5KPV|1|26|C|1147
5KPV|1|26|U|1148
5KPV|1|26|C|1149
Current chains
- Chain 26
- 16S ribosomal RNA
Nearby chains
- Chain 13
- 30S ribosomal protein S9
- Chain 14
- 30S ribosomal protein S10
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