IL_5L3P_107
3D structure
- PDB id
- 5L3P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CCUAAC*GGG
- Length
- 9 nucleotides
- Bulged bases
- 5L3P|1|a|C|48, 5L3P|1|a|A|51
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5L3P_107 not in the Motif Atlas
- Homologous match to IL_5J7L_003
- Geometric discrepancy: 0.1802
- The information below is about IL_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14177.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
5L3P|1|a|C|47
5L3P|1|a|C|48
5L3P|1|a|U|49
5L3P|1|a|A|50
5L3P|1|a|A|51
5L3P|1|a|C|52
*
5L3P|1|a|G|359
5L3P|1|a|G|360
5L3P|1|a|G|361
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain z
- GTP pyrophosphokinase,GTP pyrophosphokinase,GTP pyrophosphokinase
Coloring options: