IL_5L3P_148
3D structure
- PDB id
- 5L3P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCUGCAU*AUG(2MG)C
- Length
- 12 nucleotides
- Bulged bases
- 5L3P|1|a|C|1054
- QA status
- Modified nucleotides: 2MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5L3P_148 not in the Motif Atlas
- Homologous match to IL_5J7L_047
- Geometric discrepancy: 0.2109
- The information below is about IL_5J7L_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5L3P|1|a|G|1050
5L3P|1|a|C|1051
5L3P|1|a|U|1052
5L3P|1|a|G|1053
5L3P|1|a|C|1054
5L3P|1|a|A|1055
5L3P|1|a|U|1056
*
5L3P|1|a|A|1204
5L3P|1|a|U|1205
5L3P|1|a|G|1206
5L3P|1|a|2MG|1207
5L3P|1|a|C|1208
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
- Chain y
- Transfer RNA; tRNA
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