3D structure

PDB id
5L3P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
UUUGUUGC*GAACUCAAA
Length
17 nucleotides
Bulged bases
5L3P|1|a|U|1126
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5L3P|1|a|U|1121
5L3P|1|a|U|1122
5L3P|1|a|U|1123
5L3P|1|a|G|1124
5L3P|1|a|U|1125
5L3P|1|a|U|1126
5L3P|1|a|G|1127
5L3P|1|a|C|1128
*
5L3P|1|a|G|1144
5L3P|1|a|A|1145
5L3P|1|a|A|1146
5L3P|1|a|C|1147
5L3P|1|a|U|1148
5L3P|1|a|C|1149
5L3P|1|a|A|1150
5L3P|1|a|A|1151
5L3P|1|a|A|1152

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain i
30S ribosomal protein S9
Chain j
30S ribosomal protein S10

Coloring options:

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