IL_5L3P_170

3D structure

PDB id

5L3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGGGUAGA*UGCGAAUAC

Length

17 nucleotides

Bulged bases

5L3P|1|A|G|914

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5L3P|1|A|G|856
5L3P|1|A|G|857
5L3P|1|A|G|858
5L3P|1|A|G|859
5L3P|1|A|U|860
5L3P|1|A|A|861
5L3P|1|A|G|862
5L3P|1|A|A|863
*
5L3P|1|A|U|913
5L3P|1|A|G|914
5L3P|1|A|C|915
5L3P|1|A|G|916
5L3P|1|A|A|917
5L3P|1|A|A|918
5L3P|1|A|U|919
5L3P|1|A|A|920
5L3P|1|A|C|921

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L27

Chain 3

50S ribosomal protein L30

Chain B

5S ribosomal RNA; 5S rRNA

Chain Q

50S ribosomal protein L16