IL_5L3P_171
3D structure
- PDB id
- 5L3P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGGGG*CUUACC
- Length
- 11 nucleotides
- Bulged bases
- 5L3P|1|A|A|896
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5L3P_171 not in the Motif Atlas
- Homologous match to IL_5J7L_274
- Geometric discrepancy: 0.5666
- The information below is about IL_5J7L_274
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
5L3P|1|A|G|879
5L3P|1|A|G|880
5L3P|1|A|G|881
5L3P|1|A|G|882
5L3P|1|A|G|883
*
5L3P|1|A|C|893
5L3P|1|A|U|894
5L3P|1|A|U|895
5L3P|1|A|A|896
5L3P|1|A|C|897
5L3P|1|A|C|898
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain z
- GTP pyrophosphokinase,GTP pyrophosphokinase,GTP pyrophosphokinase
Coloring options: