IL_5L3P_173

3D structure

PDB id

5L3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAGGCCCAGACAG*UCGAGUCGGC

Length

24 nucleotides

Bulged bases

5L3P|1|A|C|1045, 5L3P|1|A|A|1046

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5L3P|1|A|G|1038
5L3P|1|A|A|1039
5L3P|1|A|A|1040
5L3P|1|A|G|1041
5L3P|1|A|G|1042
5L3P|1|A|C|1043
5L3P|1|A|C|1044
5L3P|1|A|C|1045
5L3P|1|A|A|1046
5L3P|1|A|G|1047
5L3P|1|A|A|1048
5L3P|1|A|C|1049
5L3P|1|A|A|1050
5L3P|1|A|G|1051
*
5L3P|1|A|U|1108
5L3P|1|A|C|1109
5L3P|1|A|G|1110
5L3P|1|A|A|1111
5L3P|1|A|G|1112
5L3P|1|A|U|1113
5L3P|1|A|C|1114
5L3P|1|A|G|1115
5L3P|1|A|G|1116
5L3P|1|A|C|1117

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 9

50S ribosomal protein L36

Chain H

50S ribosomal protein L6

Chain J

50S ribosomal protein L10

Chain Q

50S ribosomal protein L16

Chain Z

50S ribosomal protein L25