IL_5L3P_194

3D structure

PDB id

5L3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUGCC*GGAGGAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5L3P|1|a|C|1158
5L3P|1|a|U|1159
5L3P|1|a|G|1160
5L3P|1|a|C|1161
5L3P|1|a|C|1162
*
5L3P|1|a|G|1174
5L3P|1|a|G|1175
5L3P|1|a|A|1176
5L3P|1|a|G|1177
5L3P|1|a|G|1178
5L3P|1|a|A|1179
5L3P|1|a|A|1180
5L3P|1|a|G|1181

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain b

30S ribosomal protein S2

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9