IL_5LKS_024

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCACCCCUCCC*GGGCCCGGGGGAGGGG

Length

27 nucleotides

Bulged bases

5LKS|1|L5|C|1214, 5LKS|1|L5|G|1221

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|C|1076
5LKS|1|L5|C|1077
5LKS|1|L5|A|1078
5LKS|1|L5|C|1079
5LKS|1|L5|C|1080
5LKS|1|L5|C|1081
5LKS|1|L5|C|1082
5LKS|1|L5|U|1083
5LKS|1|L5|C|1084
5LKS|1|L5|C|1085
5LKS|1|L5|C|1086
*
5LKS|1|L5|G|1211
5LKS|1|L5|G|1212
5LKS|1|L5|G|1213
5LKS|1|L5|C|1214
5LKS|1|L5|C|1215
5LKS|1|L5|C|1216
5LKS|1|L5|G|1217
5LKS|1|L5|G|1218
5LKS|1|L5|G|1219
5LKS|1|L5|G|1220
5LKS|1|L5|G|1221
5LKS|1|L5|A|1222
5LKS|1|L5|G|1232
5LKS|1|L5|G|1233
5LKS|1|L5|G|1234
5LKS|1|L5|G|1235

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LE

60S ribosomal protein L6

Chain LF

60S ribosomal protein L7