IL_5LKS_034
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GC*GGU
- Length
- 5 nucleotides
- Bulged bases
- 5LKS|1|L5|G|1577
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LKS_034 not in the Motif Atlas
- Geometric match to IL_4V9F_026
- Geometric discrepancy: 0.2556
- The information below is about IL_4V9F_026
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_28408.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 60
Unit IDs
5LKS|1|L5|G|1550
5LKS|1|L5|C|1551
*
5LKS|1|L5|G|1576
5LKS|1|L5|G|1577
5LKS|1|L5|U|1578
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LA
- 60S ribosomal protein L8
- Chain LR
- 60S ribosomal protein L19
- Chain Lp
- 60S ribosomal protein L37a
Coloring options: