IL_5LKS_068

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUUGAG*UUACCAC

Length

13 nucleotides

Bulged bases

5LKS|1|L5|U|3914, 5LKS|1|L5|A|4385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|3913
5LKS|1|L5|U|3914
5LKS|1|L5|U|3915
5LKS|1|L5|G|3916
5LKS|1|L5|A|3917
5LKS|1|L5|G|3918
*
5LKS|1|L5|U|4383
5LKS|1|L5|U|4384
5LKS|1|L5|A|4385
5LKS|1|L5|C|4386
5LKS|1|L5|C|4387
5LKS|1|L5|A|4388
5LKS|1|L5|C|4389

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain LC

60S ribosomal protein L4

Chain La

60S ribosomal protein L27a