3D structure

PDB id
5LKS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure-function insights reveal the human ribosome as a cancer target for antibiotics
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
UUGUG*UUUUUG
Length
11 nucleotides
Bulged bases
5LKS|1|L5|U|4437
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5LKS|1|L5|U|4403
5LKS|1|L5|U|4404
5LKS|1|L5|G|4405
5LKS|1|L5|U|4406
5LKS|1|L5|G|4407
*
5LKS|1|L5|U|4435
5LKS|1|L5|U|4436
5LKS|1|L5|U|4437
5LKS|1|L5|U|4438
5LKS|1|L5|U|4439
5LKS|1|L5|G|4440

Current chains

Chain L5
28S ribosomal RNA

Nearby chains

Chain LB
60S ribosomal protein L3
Chain LI
60S ribosomal protein L10-like

Coloring options:

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