IL_5LKS_089

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAUUAU*AGAAUCC

Length

14 nucleotides

Bulged bases

5LKS|1|L5|A|4708

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|4679
5LKS|1|L5|G|4680
5LKS|1|L5|A|4681
5LKS|1|L5|U|4682
5LKS|1|L5|U|4683
5LKS|1|L5|A|4684
5LKS|1|L5|U|4685
*
5LKS|1|L5|A|4705
5LKS|1|L5|G|4706
5LKS|1|L5|A|4707
5LKS|1|L5|A|4708
5LKS|1|L5|U|4709
5LKS|1|L5|C|4710
5LKS|1|L5|C|4711

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LH

60S ribosomal protein L9

Chain LO

60S ribosomal protein L13a

Chain Lm

Ubiquitin-60S ribosomal protein L40