IL_5LKS_090

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCCGCGGAGC*GAACCUGGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|4737
5LKS|1|L5|C|4738
5LKS|1|L5|C|4739
5LKS|1|L5|G|4740
5LKS|1|L5|C|4741
5LKS|1|L5|G|4742
5LKS|1|L5|G|4743
5LKS|1|L5|A|4744
5LKS|1|L5|G|4745
5LKS|1|L5|C|4746
*
5LKS|1|L5|G|4954
5LKS|1|L5|A|4955
5LKS|1|L5|A|4956
5LKS|1|L5|C|4957
5LKS|1|L5|C|4958
5LKS|1|L5|U|4959
5LKS|1|L5|G|4960
5LKS|1|L5|G|4961
5LKS|1|L5|C|4962

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain Lf

60S ribosomal protein L35a