IL_5LKS_092

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAACGGG*CCCUCGC

Length

15 nucleotides

Bulged bases

5LKS|1|L5|C|4895, 5LKS|1|L5|U|4925, 5LKS|1|L5|C|4926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|4891
5LKS|1|L5|A|4892
5LKS|1|L5|A|4893
5LKS|1|L5|A|4894
5LKS|1|L5|C|4895
5LKS|1|L5|G|4896
5LKS|1|L5|G|4897
5LKS|1|L5|G|4898
*
5LKS|1|L5|C|4922
5LKS|1|L5|C|4923
5LKS|1|L5|C|4924
5LKS|1|L5|U|4925
5LKS|1|L5|C|4926
5LKS|1|L5|G|4927
5LKS|1|L5|C|4928

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain LM

60S ribosomal protein L14

Chain LO

60S ribosomal protein L13a