IL_5LKS_096

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCAGAG*CGAUC

Length

11 nucleotides

Bulged bases

5LKS|1|L5|C|5013

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|5012
5LKS|1|L5|C|5013
5LKS|1|L5|A|5014
5LKS|1|L5|G|5015
5LKS|1|L5|A|5016
5LKS|1|L5|G|5017
*
5LKS|1|L5|C|5032
5LKS|1|L5|G|5033
5LKS|1|L5|A|5034
5LKS|1|L5|U|5035
5LKS|1|L5|C|5036

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LR

60S ribosomal protein L19

Chain LU

60S ribosomal protein L22

Chain LW

60S ribosomal protein L24

Chain SI

40S ribosomal protein S8