IL_5LKS_115

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAUAACU*AGCUAAUAC

Length

17 nucleotides

Bulged bases

5LKS|1|S2|U|172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|G|145
5LKS|1|S2|G|146
5LKS|1|S2|A|147
5LKS|1|S2|U|148
5LKS|1|S2|A|149
5LKS|1|S2|A|150
5LKS|1|S2|C|151
5LKS|1|S2|U|152
*
5LKS|1|S2|A|166
5LKS|1|S2|G|167
5LKS|1|S2|C|168
5LKS|1|S2|U|169
5LKS|1|S2|A|170
5LKS|1|S2|A|171
5LKS|1|S2|U|172
5LKS|1|S2|A|173
5LKS|1|S2|C|174

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain LW

60S ribosomal protein L24

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24