IL_5LKS_119
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUUCGAU*AUG
- Length
- 10 nucleotides
- Bulged bases
- 5LKS|1|S2|U|368, 5LKS|1|S2|C|369
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LKS_119 not in the Motif Atlas
- Geometric match to IL_4ERD_003
- Geometric discrepancy: 0.3299
- The information below is about IL_4ERD_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87723.1
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
5LKS|1|S2|U|366
5LKS|1|S2|U|367
5LKS|1|S2|U|368
5LKS|1|S2|C|369
5LKS|1|S2|G|370
5LKS|1|S2|A|371
5LKS|1|S2|U|372
*
5LKS|1|S2|A|392
5LKS|1|S2|U|393
5LKS|1|S2|G|394
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LR
- 60S ribosomal protein L19
- Chain SI
- 40S ribosomal protein S8
- Chain SL
- 40S ribosomal protein S11
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