IL_5LKS_162

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGGAUCG*UGAGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|C|1742
5LKS|1|S2|G|1743
5LKS|1|S2|G|1744
5LKS|1|S2|A|1745
5LKS|1|S2|U|1746
5LKS|1|S2|C|1747
5LKS|1|S2|G|1748
*
5LKS|1|S2|U|1786
5LKS|1|S2|G|1787
5LKS|1|S2|A|1788
5LKS|1|S2|G|1789
5LKS|1|S2|A|1790
5LKS|1|S2|A|1791
5LKS|1|S2|G|1792

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain LW

60S ribosomal protein L24

Chain SG

40S ribosomal protein S6

Chain SI

40S ribosomal protein S8