IL_5LKS_165

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAGAUCAG*CUGUCUG

Length

15 nucleotides

Bulged bases

5LKS|1|L5|U|13

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|C|9
5LKS|1|L5|A|10
5LKS|1|L5|G|11
5LKS|1|L5|A|12
5LKS|1|L5|U|13
5LKS|1|L5|C|14
5LKS|1|L5|A|15
5LKS|1|L5|G|16
*
5LKS|1|L8|C|141
5LKS|1|L8|U|142
5LKS|1|L8|G|143
5LKS|1|L8|U|144
5LKS|1|L8|C|145
5LKS|1|L8|U|146
5LKS|1|L8|G|147

Current chains

Chain L5

28S ribosomal RNA

Chain L8

5.8S ribosomal RNA

Nearby chains

Chain LG

60S ribosomal protein L7a

Chain LN

60S ribosomal protein L15

Chain LX

60S ribosomal protein L23a

Chain Lh

60S ribosomal protein L35