IL_5LKS_171
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCGAUAGUCAACAAGUACCGUAAGGGAAAG*CUCGG
- Length
- 35 nucleotides
- Bulged bases
- 5LKS|1|L5|U|354, 5LKS|1|L5|A|362, 5LKS|1|L8|C|23
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|L5|C|350
5LKS|1|L5|C|351
5LKS|1|L5|G|352
5LKS|1|L5|A|353
5LKS|1|L5|U|354
5LKS|1|L5|A|355
5LKS|1|L5|G|356
5LKS|1|L5|U|357
5LKS|1|L5|C|358
5LKS|1|L5|A|359
5LKS|1|L5|A|360
5LKS|1|L5|C|361
5LKS|1|L5|A|362
5LKS|1|L5|A|363
5LKS|1|L5|G|364
5LKS|1|L5|U|365
5LKS|1|L5|A|366
5LKS|1|L5|C|367
5LKS|1|L5|C|368
5LKS|1|L5|G|369
5LKS|1|L5|U|370
5LKS|1|L5|A|371
5LKS|1|L5|A|372
5LKS|1|L5|G|373
5LKS|1|L5|G|374
5LKS|1|L5|G|375
5LKS|1|L5|A|376
5LKS|1|L5|A|377
5LKS|1|L5|A|378
5LKS|1|L5|G|379
*
5LKS|1|L8|C|21
5LKS|1|L8|U|22
5LKS|1|L8|C|23
5LKS|1|L8|G|24
5LKS|1|L8|G|25
Current chains
- Chain L5
- 28S ribosomal RNA
- Chain L8
- 5.8S ribosomal RNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LY
- 60S ribosomal protein L26
- Chain Lj
- 60S ribosomal protein L37
- Chain Ll
- 60S ribosomal protein L39
Coloring options: